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Case Report |
1 Department of Microbiology, St Vincent's Hospital, Sydney, Australia
2 Department of Haematology, St Vincent's Hospital, Sydney, Australia
Correspondence
D. Stark
dstark{at}stvincents.com.au
Received 13 November 2006
Accepted 10 January 2007
Abbreviations: ITS, internal transcribed spacer.
| Case report |
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The patient was initially treated for sinusitis with intravenous antibiotics at a rural hospital. Sinus washout was performed after 72 h as his condition was worsening and pathological review of washout material demonstrated copious fungal elements. He was urgently transferred to the transplant centre, where treatment was commenced with liposomal amphotericin 5 mg kg1 per day. Fifteen days after the initial presentation, MR and CT scans demonstrated extensive sinusitis with extension into the inferior left orbit and soft tissues of the left face. CT of the chest and abdomen demonstrated multiple cavitating pulmonary nodules. Sinus washout and biopsies of the sinus mucosa and a lung nodule confirmed invasive fungal infection with the morphological appearance of a zygomycete infection. Subsequent culture identified Rhizopus microsporus. Further surgery with sinus debridement and excision was performed. After 8 days of liposomal amphotericin B therapy there was no clinical or radiological response and the dose was increased to 7.5 mg kg1 and subsequently 10 mg kg1 per day after a further 4 days without clinical response. After 25 days therapy the patient remained unwell and serial CT scanning demonstrated no improvement. Posaconazole (200 mg q.i.d. orally) was commenced through a compassionate access scheme, the only mechanism of obtaining the drug in Australia at the time. Liposomal amphotericin B was continued but the dose was reduced and subsequently ceased because of nephrotoxicity and lack of apparent clinical response (total dose >12 g). Intravenous gamma-globulin was given to correct hypogammaglobulinaemia and immunosuppressive therapy was reduced.
Within 7 days of commencing posaconazole there was significant clinical improvement with reduction of facial pain and swelling. A CT scan performed 9 days after commencement of posaconazole demonstrated stabilization of disease and the patient was well enough to be discharged from hospital, continuing therapy as an outpatient. Four weeks later the patient developed a left orbital cellulitis with an underlying orbital abscess associated with neutropenia related to mycophenolate mofetil therapy. This was surgically drained and the neutropenia resolved with granulocyte-colony stimulating factor therapy and withdrawal of mycophenolate mofetil. Cultures grew group D streptococcus and the infection responded to intravenous antibiotics. No fungi were isolated.
Four months later the patient was readmitted with recurrent facial pain, and further surgery demonstrated extensive necrotic tissue. Frontal and left maxillary sinuses and the left orbital floor were resected. Biopsies revealed necrotic tissue containing fungal hyphae but fungal cultures were negative. Two weeks after surgery the patient experienced an acute, life-threatening epistaxis due to erosion of the right internal carotid artery. The artery was subsequently embolized without further complication.
Six months after commencing posaconazole the patient was well and asymptomatic, and his maxillary sinus had closed. A CT scan demonstrated no further bony erosion of the sinuses and improvement in the pulmonary lesions was noted.
Further sinus surgery and debridement of necrotic tissue was performed 7 and 9 months after commencing therapy. Biopsies again revealed necrotic tissue containing fungal hyphae, with fungal cultures remaining negative. CT scanning of sinuses and chest showed that they remained stable.
One year after infection the patient remains well and continues posaconazole therapy.
| Microbiology |
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Genomic DNA was extracted from the clinical cultures using a QIAamp DNA Mini kit (QIAGEN) and DNA amplification of the internal transcribed spacer (ITS) regions of the rRNA gene complex was followed by sequencing. The PCR assay was performed using two oligonucleotide fungal primers (ITS1 and ITS4) targeting the ITS regions of the rRNA gene complex, as described previously (Henry et al., 2000). The PCR products were then purified using the QIAquick PCR Purification kit (QIAGEN) as per the manufacturer's instructions. The PCR product was sequenced directly in both directions using the ITS1 and ITS4 primers on an ABI Prism 3730 automated sequencer at the SUPAMAC facility (Royal Prince Alfred Hospital, Sydney). The sequences were then compared to those available in the GenBank databases using the BLASTN program run on the National Center for Biotechnology Information server (http://www.ncbi.nlm.nih.gov/BLAST/).
The ITS gene sequences generated from both the clinical and environmental samples were identical and showed 100 % similarity with the sequence of the ITS gene from the CBS 343.29 strain of R. microsporus var. rhizopodiformis (GenBank accession no. AY243958).
| Discussion |
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The ITS regions have been shown to be species-specific for the differentiation of a wide variety of fungal pathogens, including zygomycetes, and offer a rapid identification (Henry et al., 2000; Iwen et al., 2002, 2005). The ITS regions are located between the 18S and 28S rRNA genes and have approximately 100 copies per fungal genome, which increases sensitivity of the assay. As the recovery of zygomycetes from tissues can be difficult, with fungal growth often hindered by specimen processing, PCR and direct sequencing techniques may have an important role in species identification.
There are currently no valid typing techniques for any species of zygomycete and although the sequence data generated at the ITS of the rRNA gene complex regions from both the clinical and environmental isolates showed 100 % similarity, sequencing of the ITS region is not suitable for typing isolates of Rhizopus. Although there is an epidemiological suspicion of the pea straw as an environmental source of infection, the molecular technique used is not sufficiently discriminatory. However, it is very likely that the source of infection originated from the pea straw. This is consistent with the fact that R. microsporus var. rhizopodiformis is a saprophytic fungus which is most commonly found in soils and decaying matter.
Zygomycete infections have a poor outcome when complicating blood or bone marrow stem cell transplantation (Ribes et al., 2000). In our patient, the long clinical course and need for repeated surgery to excise necrotic tissue highlight the difficulties in treating this infection. There was no response to a standard dose of liposomal amphotericin B, and dose escalation caused renal toxicity. It is likely that the combination of repeated surgery, reduction of immunosuppression and posaconazole were the important factors in achieving control of the infection. This is consistent with the therapeutic recommendations of other authors (Ribes et al., 2000). The repeated findings in this patient of fungal hyphae in necrotic tissue, even without positive culture, suggests that long-term therapy with posaconazole as well as regular surgical examination and debridement are needed for a successful outcome. Posaconazole was well tolerated without any apparent toxicity.
This is only the second reported case of a clinical isolate of R. microsporus var. rhizopodiformis confirmed by molecular techniques. The ITS region has not been previously used for identification of the organism from a clinical source. This report highlights the usefulness of ITS sequence analysis for identification of uncommon pathogenic species.
| ACKNOWLEDGEMENTS |
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| REFERENCES |
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