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1College of Bioscience and Biotechnology, Yangzhou University, 225009, PR China 2Department of Food Science, Cornell University, Ithaca, NY 14853, USA
Correspondence Xinan Jiao jiao{at}yzu.edu.cn
Received August 30, 2004
Accepted November 5, 2004
Human listeriosis is generally caused by consumption of ready-to-eat (RTE) foods that are stored for extended periods of time at refrigeration temperatures and that permit the growth of the causative agent, Listeria monocytogenes. Food-consumption patterns in China are undergoing rapid changes and more regular consumption of refrigerated-storage RTE foods may increase the risk of human listeriosis. In total, 40 L. monocytogenes isolates were obtained from food (n = 32) and sewage (n = 6) samples and from two human listeriosis cases that occurred in China. All isolates were characterized into molecular subtypes by DNA sequencing of the 597 bp 3'-terminal region of the virulence gene actA. Sequence data were used to classify the 40 Chinese L. monocytogenes isolates into sequence types and phylogenetic lineages, and to compare the sequence types of the Chinese isolates with those of isolates from the USA. Phylogenetic analyses showed that the Chinese isolates could be separated into two genetic lineages, with 14 and 26 isolates belonging to lineages I and II, respectively. Lineage II could be subdivided further into two clusters, IIA and IIB. Lineages I and II were identical to the two lineages described previously among US L. monocytogenes isolates. In total, 14 actA sequence types could be differentiated among the 40 Chinese L. monocytogenes isolates; two specific actA sequence types were found among both Chinese and US isolates. Isolates belonging to lineage II showed a significantly lower ability to invade and multiply within human intestinal epithelial Caco-2 cells than lineage I isolates. It was concluded that DNA sequencing of the 3'-terminal region of actA appears to be an effective method for rapid subtype and lineage classification of L. monocytogenes. As strains belonging to lineages I and II have previously been found among isolates from Europe and North America, these results show that L. monocytogenes clonal groups found in China are very similar to those found in the USA. Many L. monocytogenes strains may thus represent globally distributed clonal types. Together with the first description of two human listeriosis cases in China, these data indicate that changes in food-distribution and -consumption patterns in China and other countries will probably lead to the emergence of human listeriosis as a food-safety issue, as virulent strains of this pathogen appear to be present in the Chinese food supply.
Present address: Department of Veterinary Microbiology and Pathology, Washington State University, 402 Bustad Hall, Pullman, WA 99164-7040, USA.
| INTRODUCTION |
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DNA sequencing-based methods are increasingly being developed and used for subtyping and characterizing bacterial isolates. The advantages of DNA sequence-based subtyping methods over DNA fragment size-based typing methods include their ability to generate unambiguous data that are portable through web-based databases and that can be used for phylogenetic analyses (Chan et al., 2001; Enright et al., 2001). Cai et al. (2002) showed that actA, a virulence gene that encodes a protein facilitating cell-to-cell spread of L. monocytogenes between host cells, is highly polymorphic among L. monocytogenes isolates; sequencing of actA can thus be used to differentiate L. monocytogenes strains effectively. Specifically, sequencing of the 600 bp 3'-terminal region of actA allowed discrimination of the 15 L. monocytogenes isolates used into 13 sequence types (Cai et al., 2002).
The goal of the study reported here was to define the phylogenetic diversity of L. monocytogenes strains found in China by using DNA sequencing-based subtyping methods and to characterize the virulence potential of selected strains by using a tissue-culture assay with human intestinal epithelial cells. In total, 40 L. monocytogenes isolates obtained from food and sewage samples and from two human listeriosis cases in China were characterized by DNA sequencing of a 597 bp 3' fragment of actA. Whilst multilocus sequence typing (MLST) methods have been reported for L. monocytogenes (Cai et al., 2002), sequencing of a single, highly variable gene was chosen as a highly economical alternative to MLST methods. Phylogenetic analyses and comparisons of partial actA sequences for Chinese L. monocytogenes isolates with previously reported actA sequences for L. monocytogenes isolates collected in the USA showed that L. monocytogenes isolates found in China represent the same two major L. monocytogenes lineages found previously among isolates from the USA and Europe (Ericsson et al., 2000; Rasmussen et al., 1995; Wiedmann et al., 1997). Lineage I isolates showed higher invasiveness and cell-to-cell spread characteristics than lineage II isolates, consistent with the predominance of lineage I strains among human cases (Wiedmann et al., 1997; Wiedmann, 2002).
| METHODS |
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The actA sequences for L. monocytogenes isolates collected predominantly in the USA were obtained from Cai et al. (2002). Eleven of the 15 isolates used by Cai et al. (2002) represented human and food isolates from the USA and one isolate was obtained from Europe (FSL X1-002). The geographical origins of the remaining three isolates (FSL J1-022, FSL W1-110 and FSL W1-111) were not available.
PCR.
PCR primers were designed based on the published nucleotide sequence for actA (GenBank accession no. NC_003210). Primers 01 (5'-GCTGATTTAAGAGATAGAGGAACA-3') and 02 (5'-TTTATGTGGT TATTTGCTGTC-3') amplified an 827 bp DNA fragment that corresponded to the 3' end of actA. Primers were synthesized by TaKaRa Biotechnology Co. PCR was performed in 100 µl reaction volumes containing 96 µl PCR mastermix (4 µl each primer at 12.5 µM, 10 µl 10x PCR buffer, 6.0 µl 25 mM MgCl2, 5.0 µl 1 mM dNTP mix, 67 µl ddH20) and 4 µl L. monocytogenes cell lysate. Thermocycling conditions included an initial hold of 2 min at 94 °C, followed by 35 cycles of 94 °C for 1 min, 50 °C for 1 min and 72 °C for 1 min. A final extension step of 72 °C for 10 min was followed by a hold at 4 °C.
Purification and sequencing of PCR products.
A 3 µl aliquot of each PCR product was run on a 1.5 % agarose gel to confirm successful amplification of actA. The remaining 97 µl of each PCR product was purified by using a QIAquick PCR Purification kit (Qiagen). DNA sequencing was performed at TaKaRa Biotechnology Co., using both PCR primers to obtain forward and reverse sequences. Where necessary, PCR sequencing was repeated to confirm DNA sequence polymorphisms.
Sequence analysis and construction of a phylogenetic tree.
Partial actA sequences obtained for the 40 Chinese L. monocytogenes isolates were aligned with the corresponding actA sequences for the 15 isolates reported by Cai et al. (2002) by using MEGALIGN in the Lasergene software package (DNAStar). Neighbour-joining trees were constructed by using MEGA v. 2.1 (Kumar et al., 2001).
Tissue-culture invasion assay and intracellular growth assays.
Enterocyte-like Caco-2 cells (obtained from P. Cossart, Institut Pasteur, Paris, France) were cultured in Dulbecco's modified Eagle's medium (DMEM) supplemented with 15 % heat-inactivated (30 min at 56 °C) fetal bovine serum (FBS) and 10 µg gentamicin ml1. For invasion and intracellular growth assays, Caco-2 cells were trypsinized and seeded into six-well plates at a concentration of 1x106 cells per well. Cells were grown without gentamicin to form a monolayer (7276 h at 37 °C) in DMEM supplemented with 15 % heat-inactivated FBS. The medium was changed every 24 h. L. monocytogenes isolates were grown on brainheart infusion (BHI) broth (Difco) at 37 °C for 24 h prior to infection. Bacteria were harvested, adjusted to a concentration of approximately 3x106 bacteria ml1 in DMEM and added to each well, resulting in an m.o.i. of approximately 30 bacteria per host cell. Following 2 h incubation at 37 °C, cells were washed three times with PBS to remove non-adherent bacteria. To kill extracellular bacteria, 2 ml DMEM containing gentamicin (10 µg ml1) was added to the wells and the cells were then incubated for 1.5 h at 37 °C with 5 % CO2. Cells were then lysed with 1 ml ice-cold 0.1 % Triton X-100 and the number of viable intracellular bacteria was determined by plating serial dilutions onto BHI agar plates. Invasion efficiency for each isolate was calculated as the ratio of the number of bacteria internalized at 3.5 h post-infection to the number of bacteria used for infection. To measure intracellular growth, DMEM supplemented with 5 µg gentamicin ml1 was used as the growth medium after infection and infected cells were incubated for 19.5 h after removal of extracellular bacteria (Van Langendonck et al., 1998). The number of intracellular bacteria was then enumerated at 21.5 h post-infection as described above and intracellular doubling times between 3.5 and 21.5 h post-infection were calculated. In total, 24 selected isolates, representing 12 lineage I and 12 lineage II isolates (see Table 3), were tested in duplicate on two separate occasions.
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| RESULTS |
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Phylogenetic analysis of partial actA sequences
actA sequences, encompassing a total of 597 bp at the 3' end of actA, were obtained for all 40 L. monocytogenes isolates from China. A neighbour-joining tree constructed by using these 40 actA sequences, as well as corresponding partial actA sequences obtained by Cai et al. (2002), showed that these sequences could be separated into two major lineages (Fig. 1), consistent with the major lineages described previously (Wiedmann et al., 1997). Lineage II could be separated further into two clusters, IIA and IIB (Fig. 1).
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Distribution of actA sequence types and L. monocytogenes lineages among US and Chinese isolates
Among the 40 L. monocytogenes isolates obtained from China, 14 grouped into lineage I and 26 grouped into lineage II. Grouping of L. monocytogenes into clusters IIA and IIB was also found among both Chinese and US L. monocytogenes isolates. No Chinese L. monocytogenes isolates grouped with the lineage III isolates included in the 15 isolates used by Cai et al. (2002). The two human clinical isolates collected in China (Lm1579 and Lm1191) grouped into lineages I and II, respectively. All Chinese isolates from ready-to-eat (RTE) food products, except Lm03040704 and Lm03061104, grouped into lineage II (Table 1). Isolates from fresh food products were found in both lineages, with 10 isolates belonging to lineage I and 12 isolates belonging to lineage II.
In total, 14 actA sequence types could be differentiated among the 40 L. monocytogenes isolates from China. Two lineage I actA sequence types (10 and 14; Table 1) were represented among both Chinese and US isolates.
Nucleotide and deduced amino acid sequence similarities among actA 3'-end sequences
Nucleotide and deduced ActA amino acid sequences for the 597 bp 3'-end sequences of actA were compared for the 40 Chinese L. monocytogenes isolates, as well as for the 15 isolates reported by Cai et al. (2002). Nucleotide sequence similarities within clusters IIA and IIB varied from 99.7 to 100 % and from 99.3 to 100 %, respectively. Nucleotide sequence similarities within lineage I and lineage II isolates ranged from 98.8 to 100 % and from 90.8 to 100 %, respectively. Nucleotide sequence similarity between different lineages varied from 89.4 to 96.3 % (89.4 to 90.3 % between lineages I and II; 90.5 to 96.3 % between lineages I and III; 87.1 to 90.3 % between lineages II and III).
Amino acid sequence similarities within lineages I, II and III ranged from 97.5 to 100, 98.0 to 100 and 91.5 to 98.5 %, respectively. Amino acid sequence similarities between lineages I and II, I and III, and II and III ranged from 84.3 to 85.9 %, from 83.8 to 85.9 % and from 84.8 to 85.4 %, respectively. Nineteen amino acid sites showed consistent differences among lineages I, II and III (Table 2).
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Caco-2 cell invasion and intracellular growth phenotypes for selected lineage I and II isolates
The ability of 12 lineage I and 12 lineage II isolates to invade and multiply in intestinal epithelial cells was evaluated by using an in vitro model with human enterocyte-like Caco-2 cells (Table 3). The mean invasion efficiency for lineage I isolates (10.2 %) was significantly higher (t-test; P < 0.05) than that for lineage II isolates (0.8 %). The mean intracellular doubling time for lineage I isolates (3.2 h) was significantly shorter (t-test, P < 0.05) than that for lineage II isolates (5.8 h).
| DISCUSSION |
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Partial actA sequencing represents an economical and discriminatory subtyping and lineage-classification method for L. monocytogenes
Whilst a variety of molecular subtyping methods for L. monocytogenes have been described and are used for scientific studies and surveillance purposes, many methods are expensive and time-consuming and, thus, do not lend themselves to routine application for subtyping of large numbers of isolates in many public-health systems. In addition, many of the commonly used DNA banding pattern-based subtyping methods (e.g. ribotyping, PFGE and RAPD) are difficult to standardize and do not provide information suitable for evolutionary analyses. Initial data reported by Cai et al. (2002) showed that DNA sequencing of a 600 bp fragment representing the 3' end of actA could differentiate 15 L. monocytogenes isolates, representing eight EcoRI ribotypes, into 13 actA sequence types. Thus, actA sequencing, as used here, provides higher subtype discrimination than EcoRI ribotyping, a commonly used molecular subtyping method for L. monocytogenes (Aarnisalo et al., 2003; Mereghetti et al., 2002; Nadon et al., 2001; Wiedmann et al., 1997). Discrimination of 40 L. monocytogenes isolates collected in China into 14 actA sequence types further supports the use of actA sequencing as a sensitive molecular subtyping method.
Our data also showed that DNA sequencing of the 3' portion of actA not only provides sensitive subtype discrimination, but also allows for evolutionarily meaningful lineage classification of L. monocytogenes isolates. Phylogenetic analyses of partial actA sequences for the 40 Chinese L. monocytogenes isolates and the corresponding actA sequences for the 15 isolates reported by Cai et al. (2002) showed a clear separation of L. monocytogenes into the previously reported two main L. monocytogenes lineages, I and II (Fig. 1) (Call et al., 2003; Ericsson et al., 2000; Wiedmann et al., 1997). These lineages correlated with L. monocytogenes serotypes: lineage I comprised serotypes 1/2b, 3b, 3c and 4b and lineage II comprised serotypes 1/2a, 1/2c and 3a (Nadon et al., 2001). In addition, we showed that isolates representing lineage III clearly formed two separate groups that were closer to lineage I than to lineage II isolates in an actA neighbour-joining tree (Fig. 1). Thus, actA sequencing allowed reliable isolate classification into the three L. monocytogenes lineages that have previously been defined by a variety of other subtyping methods, including PFGE (Brosch et al., 1994; Chasseignaux et al., 2001), ribotyping (Wiedmann et al., 1997) and DNA sequence data for sigB (Moorhead et al., 2003), flaA, iap and hly (Rasmussen et al., 1995).
Three other L. monocytogenes virulence genes (hly, plcA and inlA) have previously been characterized in two serovar 4b strains and two serovar 1/2b strains (Vines & Swaminathan, 1998), which belong to lineage I (Nadon et al., 2001). The nucleotide and amino acid similarities among these lineage I strains and strains of serovars 1/2a and 1/2c, which belong to lineage II (Nadon et al., 2001), ranged from 97.3 to 98.8 % and from 97.8 to 99.4 %, respectively. In the present study, the corresponding similarity values among lineage I and II isolates were 89.4 to 90.3 % and 84.3 to 85.9 %, respectively. This indicates that partial actA sequencing may be better suited to differentiation and classification of L. monocytogenes into lineages than sequencing of other virulence genes (hly, plcA and inlA). Whilst actA sequencing allowed the differentiation of two clusters within lineage II (IIA and IIB), similar subdivisions could not be defined based on inlB sequencing (Ericsson et al., 2000), further supporting the suggestion that partial sequencing of the actA gene may provide a more sensitive subtyping and lineage classification than other virulence genes. A study by Moorhead et al. (2003) also showed that L. monocytogenes could be divided into three lineages based on the nucleotide sequence for sigB, which encodes a stress-responsive alternative sigma factor in L. monocytogenes. The deduced sigma B amino acid sequence, however, was highly conserved and showed only one polymorphic site (Phe216Tyr) (Moorhead et al., 2003). By comparison, we have shown that the deduced protein sequence of the partial actA gene is highly polymorphic, with 19 consistent amino acid differences between lineages I and II. These data not only support the suitability of actA sequencing for sensitive L. monocytogenes subtype discrimination, but also show that ActA is a highly polymorphic virulence protein; it is thus tempting to speculate that these polymorphisms may contribute to the proposed virulence differences between strains of lineages I and II (Wiedmann et al., 1997).
L. monocytogenes subtypes found in China and in Europe and North America represent the same lineages and similar clonal groups
A PubMed search, conducted on 4 April 2004, revealed very limited information available in English-language journals on the epidemiology of listeriosis in China. In particular, no published reports on human listeriosis cases in China were found. This current study not only represents one of the first reports on the L. monocytogenes molecular subtypes present in the food system in China, but also reports the occurrence of two human listeriosis cases in China. Our data show that the two main L. monocytogenes lineages (I and II) that have previously been described among human, food and animal isolates collected in the USA and Europe (Ericsson et al., 2000; Piffaretti et al., 1989; Rasmussen et al., 1995; Wiedmann et al., 1997) also represent the predominant lineages present in China. Similarly to previous studies in other countries (Norton et al., 2001), lineage II strains, which include serotypes 1/2a and 1/2c, were found more frequently among RTE foods than lineage I strains. Lineage I strains were predominant among isolates from meats and fresh vegetables. None of the L. monocytogenes isolates from China grouped into lineage III, which is not surprising, as Wiedmann et al. (1997) showed that strains of lineage III are rare among isolates from humans and food samples and are predominantly associated with animals; no animal isolates from China were included in this study. Interestingly, two actA sequence types (10 and 14; Table 1) were found among both Chinese isolates and human isolates obtained in the USA (Cai et al., 2002). In summary, our data suggest strongly that the L. monocytogenes strains present in China are very similar to those found in the USA and other countries. L. monocytogenes lineages and clonal groups thus appear to be distributed globally, even in countries that have previously not reported human and animal listeriosis cases.
Virulence potential of isolates representing the genotypically distinct lineages I and II
The discrepancy between the widespread distribution of L. monocytogenes in RTE food products (Inoue et al., 2000; Wiedmann, 2002) and the low incidence of listeriosis (e.g. 2500 cases per year in the USA) (Mead et al., 1999) led to the hypothesis that some L. monocytogenes strains in food products may have attenuated virulence and may thus have limited potential to cause human disease (Hof & Rocourt, 1992; Rasmussen et al., 1995). Comparative genomics showed that virulent L. monocytogenes strains may possess genes that are not present in avirulent isolates, and these markers can be used for PCR assessment of L. monocytogenes virulence (Liu et al., 2003). As the virulence of L. monocytogenes depends critically on the organism's ability to invade human intestinal epithelial cells, we evaluated the ability of selected Chinese lineage I and II L. monocytogenes isolates to invade and multiply within the human enterocyte cell line Caco-2. Our results showed that lineage I isolates had a significantly higher invasion efficiency and significantly faster doubling times than lineage II strains in this cell-culture assay. Interestingly, the one human clinical lineage II isolate showed a higher invasion efficiency (5.8 %) and shorter intracellular doubling time (3.15 h) than the other lineage II isolates (Table 3), which were obtained from food. These findings are consistent with previous studies showing that certain genetic types of L. monocytogenes found commonly in food are less invasive than others to Caco-2 cells (Larsen et al., 2002) and mouse L cells (Norton et al., 2001). As isolates from RTE food products belonged predominantly to lineage II (Table 1), we hypothesize that RTE food products in China may predominantly harbour less invasive L. monocytogenes strains. Possible reasons why RTE food products may harbour more low-virulence strains than fresh food products need to be further investigated.
Conclusions
Based on and confirming a previous small study on 15 L. monocytogenes isolates (Cai et al., 2002), we have shown that 3'-end partial nucleotide sequencing of actA provides an economical and sensitive approach for subtype and lineage classification of L. monocytogenes. By using this subtyping approach, we have also shown that L. monocytogenes isolates from foods and environmental samples collected in China represent the same major L. monocytogenes genetic lineages that have previously been identified in North America and Europe, including human listeriosis cases. The frequency of these lineages among food isolates was also comparable with that reported in many other countries, with a predominance of lineage II strains among food isolates (Norton et al., 2001). In combination with the first description of two human listeriosis cases in China, our data suggest that changes in food-distribution and -consumption patterns in China and other countries will lead to the emergence of human listeriosis as a food-safety issue, as virulent strains of this pathogen appear to be present in food systems worldwide. Furthermore, our results showed that L. monocytogenes occurring in RTE food products are predominantly lineage II strains and that lineage II strains, on average, may be less virulent than lineage I strains. This phenomenon may partly contribute to the low incidence of human listeriosis, despite the frequent human exposure to L. monocytogenes through contaminated food products.
| ACKNOWLEDGEMENTS |
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